INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_026587 | Pseudomonas phage vB_PaeM_PAO1_Ab03 | 86246 | 54.677 | Pseudomonas | Group I | Nankokuvirus | Nankokuvirus | Unclassified | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_026588 | Mycobacterium phage Squirty | 60285 | 62.405 | Mycobacterium | Group I | Squirtyvirus | Squirtyvirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacteruim smegmatis mc2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32;integrase orf_33;immunity orf_36;cro orf_37;antirepressor orf_38 | |||
| NC_026589 | Mycobacterium phage Sbash | 55832 | 65.647 | Mycobacterium | Group I | Chenonavirus | Chenonavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.200 | AAI-based (high-confidence) | temperate | integrase orf_40;antirepressor orf_45 | |||
| NC_026590 | Mycobacterium phage Gaia | 90460 | 56.831 | Mycobacterium | Group I | Gaiavirus | Gaiavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_48 | |||
| NC_026591 | Mycobacterium phage Trike | 44716 | 64.498 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | Medium-quality | Genome-fragment | 88.640 | AAI-based (high-confidence) | temperate | integrase orf_28 | |||
| NC_026593 | Mycobacterium phage BuzzLyseyear | 59419 | 61.132 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_45;immunity orf_47;antirepressor orf_49 | |||
| NC_026594 | Pseudomonas phage vB_PaeS_PAO1_Ab18 | 56537 | 63.498 | Pseudomonas | Group I | Abidjanvirus | Abidjanvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 92.600 | AAI-based (high-confidence) | lytic | ||||
| NC_026595 | Mycobacterium phage Hades | 54986 | 61.396 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacteruim smegmatis mc2 155 | High-quality | High-quality | 95.530 | AAI-based (high-confidence) | temperate | integrase orf_41;immunity orf_43 | |||
| NC_026596 | Mycobacterium phage Inventum | 57052 | 61.376 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.040 | AAI-based (high-confidence) | temperate | integrase orf_40;immunity orf_42 | |||
| NC_026597 | Mycobacterium phage Sparky | 63334 | 65.164 | Mycobacterium | Group I | Sparkyvirus | Sparkyvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacteruim smegmatis mc2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_38;immunity orf_39;cro orf_40 |