INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_023590 | Acinetobacter phage IMEAB3 | 43050 | 45.475 | Acinetobacter | Group I | Lokivirus | Lokivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_023592 | Haloarcula hispanica pleomorphic virus 2 | 8176 | 53.694 | Haloarcula | Group II | Alphapleolipovirus | Alphapleolipovirus | Unclassified | Pleolipoviridae | Haloruvirales | Huolimaviricetes | Saleviricota | Trapavirae | Floreoviria | Haloarcula hispanica ATCC 33960 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_023593 | Escherichia phage KBNP1711 | 76184 | 42.370 | Escherichia | Group I | Nieuwekanaalvirus | Nieuwekanaalvirus | Gordonclarkvirinae | Mtkvariviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli KBP1711 | High-quality | High-quality | 99.850 | AAI-based (high-confidence) | lytic | ||||
| NC_023594 | Shewanella phage Spp001 | 54791 | 49.417 | Shewanella | Group I | Yushanvirus | Yushanvirus | Nefertitivirinae | Chaseviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shewanella putrefaciens | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_023595 | Enterococcus phage IME_EF3 | 41687 | 34.598 | Enterococcus | Group I | Efquatrovirus | Efquatrovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_023597 | Mycobacterium phage 20ES | 53124 | 63.427 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_32;immunity orf_73 | |||
| NC_023599 | Bacillus phage phiCM3 | 38772 | 35.482 | Bacillus | Group I | Camtrevirus | Camtrevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus thuringiensis strain YM-03 | High-quality | High-quality | 93.560 | AAI-based (high-confidence) | temperate | antirepressor orf_35;integrase orf_51 | |||
| NC_023600 | Mycobacterium phage Julie1 | 71058 | 69.877 | Mycobacterium | Group I | Julieunavirus | Julieunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.860 | AAI-based (high-confidence) | lytic | ||||
| NC_023601 | Pseudomonas phage phiPsa374 | 98287 | 47.716 | Pseudomonas | Group I | Otagovirus | Otagovirus | Gorskivirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. actinidiae ICMP 18800 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_023602 | Mycobacterium phage 32HC | 50781 | 65.731 | Mycobacterium | Group I | Trigintaduovirus | Trigintaduovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.950 | AAI-based (high-confidence) | temperate | integrase orf_46 |