INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_018284 | Staphylococcus phage vB_SepiS-phiIPLA7 | 42123 | 34.755 | Staphylococcus | Group I | Rockefellervirus | Rockefellervirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus epidermidis | High-quality | High-quality | 97.920 | AAI-based (high-confidence) | temperate | integrase orf_29;antirepressor orf_34 | |||
| NC_018285 | Streptococcus phage YMC-2011 | 40758 | 41.239 | Streptococcus | Group I | Aliceevansviridae | Unclassified | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus salivarius 57.I | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_9;cro orf_11;antirepressor orf_16 | |||
| NC_018452 | Burkholderia phage DC1 | 61847 | 66.212 | Burkholderia | Group I | Lessievirus | Lessievirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Burkholderia cepacia LMG 18821 | High-quality | High-quality | 99.010 | AAI-based (high-confidence) | temperate | integrase orf_4 | |||
| NC_018454 | Cronobacter phage phiES15 | 39974 | 53.542 | Cronobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | UV-induced Cronobacter sakazakii ES15 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_3 | |||
| NC_018831 | Listeria phage P70 | 67170 | 36.457 | Listeria | Group I | Homburgvirus | Homburgvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_018832 | Providencia phage Redjac | 58104 | 49.499 | Providencia | Group I | Redjacvirus | Redjacvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Providencia stuartii isolate MRSN 2154 | High-quality | High-quality | 97.190 | AAI-based (high-confidence) | lytic | ||||
| NC_018834 | Propionibacterium phage P9.1 | 29214 | 54.121 | Propionibacterium | Group I | Pahexavirus | Pahexavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cutibacterium acnes | High-quality | High-quality | 99.160 | AAI-based (high-confidence) | lytic | ||||
| NC_018835 | Escherichia phage NJ01 | 77448 | 42.049 | Escherichia | Group I | Kuravirus | Kuravirus | Gordonclarkvirinae | Mtkvariviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DE172 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_018836 | Streptomyces phage phiHau3 | 50255 | 67.834 | Streptomyces | Group I | Hautrevirus | Hautrevirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces coelicolor A3(2) | High-quality | High-quality | 99.800 | AAI-based (high-confidence) | temperate | integrase orf_51 | |||
| NC_018837 | Pectobacterium phage My1 | 122024 | 40.614 | Pectobacterium | Group I | Myunavirus | Myunavirus | Mccorquodalevirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |