INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MZ398243	Escherichia phage IME267	76631	41.983	Escherichia	Group I	Suseptimavirus	Suseptimavirus	Gordonclarkvirinae	Mtkvariviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Suseptimavirus	Suseptimavirus IME267	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398244	Klebsiella phage IME184	44598	50.253	Klebsiella	Group I	Ulipvirus	Ulipvirus	Molineuxvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ulipvirus	Ulipvirus IME184	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398245	Klebsiella phage IME183	41384	52.921	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Przondovirus	Przondovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398246	Escherichia phage IME178	108588	38.783	Escherichia	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	96.090	AAI-based (high-confidence)	Tequintavirus	Tequintavirus IME178	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MZ398247	Enterobacteria phage IME177	39224	50.008	Enterobacteria	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.590	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus IME177	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MZ398248	Stenotrophomonas phage BUCT608	160122	54.150	Stenotrophomonas	Group I	Menderavirus	Menderavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Stenotrophomonas maltophilia	High-quality	High-quality	100.000	AAI-based (high-confidence)	Menderavirus	Menderavirus IMESM1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ401005	Clostridium phage CPQ3	18246	34.720	Clostridium	Group I	Brucesealvirus	Brucesealvirus	Unclassified	Guelinviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clostridium perfringens	High-quality	High-quality	100.000	AAI-based (high-confidence)	Brucesealvirus	Brucesealvirus cpq3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_8
MZ401006	Clostridium phage CPQ4	40182	30.307	Clostridium	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clostridium perfringens JCM 1290	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	antirepressor orf_10
MZ401007	Clostridium phage CPQ7	17980	34.778	Clostridium	Group I	Brucesealvirus	Brucesealvirus	Unclassified	Guelinviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clostridium perfringens JCM 1290	High-quality	High-quality	99.020	AAI-based (high-confidence)	Brucesealvirus	Brucesealvirus cpq9	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ401008	Clostridium phage CPQ9	18270	34.702	Clostridium	Group I	Brucesealvirus	Brucesealvirus	Unclassified	Guelinviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clostridium perfringens JCM 1290	High-quality	High-quality	100.000	AAI-based (high-confidence)	Brucesealvirus	Brucesealvirus cpq9	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic