INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MZ327261 | Salmonella phage vB_Si_35FD | 85818 | 38.925 | Salmonella | Group I | Felixounavirus | Felixounavirus | Ounavirinae | Andersonviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Infantis | High-quality | High-quality | 97.490 | AAI-based (high-confidence) | Felixounavirus | Felixounavirus fv35FD | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ327262 | Salmonella phage vB_Si_DR094 | 85730 | 39.178 | Salmonella | Group I | Felixounavirus | Felixounavirus | Ounavirinae | Andersonviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Infantis | High-quality | High-quality | 97.340 | AAI-based (high-confidence) | Felixounavirus | Felixounavirus DR094 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ333131 | Erwinia phage Pecta | 49573 | 47.879 | Erwinia | Group I | Citrovirus | Citrovirus | Unclassified | Zobellviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ333132 | Erwinia phage Snitter | 51564 | 48.196 | Erwinia | Group I | Drexlerviridae | Unclassified | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ333133 | Curtobacterium phage Penoan | 15303 | 68.078 | Curtobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Curtobacterium sp. | High-quality | High-quality | 98.050 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ333134 | Curtobacterium phage Pize | 18290 | 58.568 | Curtobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Curtobacterium sp. | High-quality | High-quality | 93.540 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ333135 | Erwinia phage Zoomie | 43480 | 54.425 | Erwinia | Group I | Zoomievirus | Zoomievirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia sp. | High-quality | High-quality | 99.830 | AAI-based (high-confidence) | Zoomievirus | Zoomievirus zoomie | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ333136 | Curtobacterium phage Reje | 17554 | 56.996 | Curtobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Curtobacterium sp. | High-quality | High-quality | 90.780 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ333456 | Enterococcus phage VEsP-1 | 39221 | 35.091 | Enterococcus | Group I | Vespunovirus | Vespunovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Vespunovirus | Vespunovirus vesp1 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_43;integrase orf_50 |
| MZ333457 | Enterococcus phage SSsP-1 | 57270 | 39.848 | Enterococcus | Group I | Saphexavirus | Saphexavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus sp. | Complete | High-quality | 100.000 | DTR (high-confidence) | Saphexavirus | Saphexavirus SSsP1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |