Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW960037Rhizobium phage RHph_X2_266852259.131RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_26High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW960038Rhizobium phage RHph_X3_157618545.090RhizobiumGroup I SchitoviridaeUnclassifiedUnclassifiedSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X3_15High-qualityHigh-quality99.890AAI-based (high-confidence) XoxocotlavirusXoxocotlavirus X228BCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960043Stenotrophomonas phage BUCT6094314558.285StenotrophomonasGroup I MaltophvirusMaltophvirusGujervirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas maltophiliaHigh-qualityHigh-quality100.000AAI-based (high-confidence) MaltophvirusMaltophvirus BUCT609Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW965453Ralstonia phage vB_RsoP_BMB504366561.791RalstoniaGroup I HongshanvirusHongshanvirusOkabevirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearum RS3220-1High-qualityHigh-quality100.000AAI-based (high-confidence) HongshanvirusHongshanvirus BMB50Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW978786Aeromonas phage BUCT5525968560.032AeromonasGroup I CasjensviridaeUnclassifiedUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas hydrophilaHigh-qualityHigh-quality99.580AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW980061Rhizobium phage RHph_X2_306969957.034RhizobiumGroup I CasjensviridaeUnclassifiedUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_30High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW980062Rhizobium phage RHph_I404669549.142RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium leguminosarum sv. phaseoli CIAT894High-qualityHigh-quality100.000AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHphI38Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW980063Rhizobium phage RHph_N4619245653.475RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli sv. phaseoli IE1004High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW980064Rhizobium phage RHEph1219360653.390RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli sv. giardinii IE4771High-qualityHigh-quality95.100AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_232;integrase orf_273
MW980065Rhizobium phage RHEph154620656.291RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli sv. phaseoli N1314High-qualityHigh-quality100.000AAI-based (high-confidence) TepoztlanvirusTepoztlanvirus RHphTM34Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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