Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW460249Pseudomonas phage Itty136181865.515PseudomonasGroup I IttyvirusIttyvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.790AAI-based (high-confidence) IttyvirusIttyvirus itty13Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_75
MW460250Staphylococcus phage SAOMS114013530.366StaphylococcusGroup I KayvirusKayvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality98.970AAI-based (high-confidence) KayvirusKayvirus G1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW462221Campylobacter phage CAM-P213974630.164CampylobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Campylobacter coli CAN 10Low-qualityGenome-fragment18.570HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MW464860Enterobacter phage EC1516075347.693EnterobacterGroup I QueuovirinaeUnclassifiedQueuovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacae CEMTC 2064High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW476489Lactobacillus phage vB_Lga_AB14089936.030LactobacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus gasseriHigh-qualityHigh-quality96.860AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;antirepressor orf_8
MW476490Lactobacillus phage vB_Lcr_AB14729240.654LactobacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus crispatusHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_6;antirepressor orf_7
MW477480Bacillus phage Whiting181954839.636BacillusGroup I SalasvirusSalasvirusPicovirinaeSalasmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus sp.203High-qualityHigh-quality99.830AAI-based (high-confidence) SalasvirusSalasvirus PZACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW477799Salmonella phage vB_Se_STGO-35-14748346.488SalmonellaGroup I CaminolopintovirusCaminolopintovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisHigh-qualityHigh-quality100.000AAI-based (high-confidence) CaminolopintovirusCaminolopintovirus STGO351The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MW481326Escherichia phage vB_EcoM-Pr103Blw8842138.725EscherichiaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli STEC O103CompleteHigh-quality100.000DTR (high-confidence) FelixounavirusFelixounavirus Pr103BlwCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW495044Klebsiella phage vB_KpnP_P1847661744.340KlebsiellaGroup I EfbeekayvirusEfbeekayvirusWaldeevirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 184High-qualityHigh-quality100.000AAI-based (high-confidence) EfbeekayvirusEfbeekayvirus P184Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1
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