Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW091529Bacteriophage sp. 1032311818359.121UnspecifiedUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified UnspecifiedLow-qualityGenome-fragment34.810AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW114771Vibrio phage pVco-145942846.998VibrioGroup I QueuovirinaeUnclassifiedQueuovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio coralliilyticusHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW117144Pseudomonas phage AIIMS-Pa-A14097762.293PseudomonasGroup I PhikmvvirusPhikmvvirusKrylovirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa clinical isolateHigh-qualityHigh-quality95.190AAI-based (high-confidence) PhikmvvirusPhikmvvirus AIIMSPaA1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW117965Synechococcus phage S-H3818022442.424SynechococcusGroup I YellowseavirusYellowseavirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. MW02High-qualityHigh-quality100.000AAI-based (high-confidence) YellowseavirusYellowseavirus thirtyeightCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW117966Synechococcus phage S-H9-119245440.994SynechococcusGroup I ScyllavirusScyllavirusUnclassifiedKyanoviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. MW02High-qualityHigh-quality100.000AAI-based (high-confidence) ScyllavirusScyllavirus aitchnineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW119258Klebsiella phage vB_KpnS_MK544621848.297KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.050AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MW119570Mycobacterium phage Lang4148766.831MycobacteriumGroup I LiefievirusLiefievirusGclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.450AAI-based (high-confidence) LiefievirusLiefievirus liefieCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_32
MW132713Gordonia phage TinaLin4336665.408GordoniaGroup I TinalinvirusTinalinvirusRuthgordonvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae NRRL B-16283High-qualityHigh-quality98.290AAI-based (high-confidence) TinalinvirusTinalinvirus tinalinCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_34
MW132714Mycobacterium phage Pound10990160.850MycobacteriumGroup I OmegavirusOmegavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.970AAI-based (high-confidence) OmegavirusOmegavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_78;immunity orf_83;immunity orf_174
MW145136Providencia phage PSTNGR14103358.526ProvidenciaGroup I JeruvirusJeruvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia stuartiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) JeruvirusJeruvirus PSTNGR1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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