INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MT585305	Flavobacterium phage FCOV-F42	49066	29.737	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585306	Flavobacterium phage FCOV-F43	49080	29.741	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585307	Flavobacterium phage FCOV-F44	49043	29.739	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585308	Flavobacterium phage FCOV-F47	49066	29.735	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585309	Flavobacterium phage FCOV-F48	49063	29.733	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585310	Flavobacterium phage FCOV-F56	46494	29.924	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	96.610	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585311	Flavobacterium phage V183	49076	29.738	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585312	Flavobacterium phage V184	49076	29.738	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585313	Flavobacterium phage V186	46498	29.926	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	96.620	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT585314	Flavobacterium phage V188	49076	29.738	Flavobacterium	Group I	Ficleduovirus	Ficleduovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Flavobacterium columnare	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ficleduovirus	Ficleduovirus FCV1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic