Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN988514Rhizobium phage RHph_Y2_74627356.126RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Y2_7CompleteHigh-quality100.000DTR (high-confidence) TepoztlanvirusTepoztlanvirus RHphY120Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988515Rhizobium phage RHph_N28_119345253.439RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli N731High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988516Rhizobium phage RHph_N28_25233659.164RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli N731High-qualityHigh-quality99.190AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_46;integrase orf_47
MN988517Rhizobium phage RHph_N387812646.152RhizobiumGroup I CyamitesvirusCyamitesvirusDemetervirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli BRASIL5High-qualityHigh-quality100.000AAI-based (high-confidence) CyamitesvirusCyamitesvirus N38Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988518Rhizobium phage RHph_N2_10601058.719RhizobiumGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Rhizobium phaseoli N2_10High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MN988519Rhizobium phage RHph_I1_1817097847.503RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli I1_18High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_256
MN988520Rhizobium phage RHph_I915414348.495RhizobiumGroup I TrinifflemingvirusTrinifflemingvirusStaniewskivirinaePootjesviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. R635High-qualityHigh-quality99.450AAI-based (high-confidence) TrinifflemingvirusTrinifflemingvirus I19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988521Rhizobium phage RHph_TM3020762341.049RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. N941High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988522Rhizobium phage RHph_TM4020743141.045RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium leg. CIAT894High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988523Rhizobium phage RHph_TM2_3B20625341.113RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli T2_3High-qualityHigh-quality99.870AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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