Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN988484Rhizobium phage RHph_Y606909356.505RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli TAL182High-qualityHigh-quality99.530AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988485Rhizobium phage RHph_Y67480156.697RhizobiumGroup II PiticivirusPiticivirusUnclassifiedMazaviridaeAmoyviralesMicroviricetesPhixviricotaSangerviraeFloreoviria Rhizobium phaseoli TUX10PNot-determinedGenome-fragment New_genusNew_speciesNo hits were found with the default settingsunknown
MN988486Rhizobium phage RHph_Y6815276249.387RhizobiumGroup I TrinifflemingvirusTrinifflemingvirusStaniewskivirinaePootjesviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. TUX16PHigh-qualityHigh-quality98.560AAI-based (high-confidence) TrinifflemingvirusTrinifflemingvirus Y68Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988487Rhizobium phage RHph_Y1_104323057.904RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Y1_10High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_16
MN988488Rhizobium phage RHph_Y1_204599956.114RhizobiumGroup I TepoztlanvirusTepoztlanvirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Y1_20High-qualityHigh-quality100.000AAI-based (high-confidence) TepoztlanvirusTepoztlanvirus RHphY120Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988489Rhizobium phage RHph_Y2_19603458.485RhizobiumGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Rhizobium phaseoli Y2_19High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MN988490Rhizobium phage RHph_Y3_14017358.497RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli Y3_1Medium-qualityGenome-fragment67.280AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_20
MN988491Rhizobium phage RHph_Y3_36603458.452RhizobiumGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Rhizobium phaseoli Y3_36High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MN988492Rhizobium phage RHph_TM334645449.188RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. R339High-qualityHigh-quality100.000AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHphTM33Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988493Rhizobium phage RHph_TM384645449.188RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli BRASIL5High-qualityHigh-quality100.000AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHphTM33Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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