INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MN552145	Lactococcus phage P1048	123023	32.967	Lactococcus	Group I	Audreyjarvisvirus	Audreyjarvisvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis	High-quality	High-quality	97.510	AAI-based (high-confidence)	Audreyjarvisvirus	Audreyjarvisvirus P1048	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;integrase orf_143
MN552146	Leuconostoc phage P965	26526	36.504	Leuconostoc	Group I	Limdunavirus	Limdunavirus	Mccleskeyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Leuconostoc pseudomesenteroides	High-quality	High-quality	98.850	AAI-based (high-confidence)	Limdunavirus	Limdunavirus P965	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN552147	Leuconostoc phage P974	27942	36.032	Leuconostoc	Group I	Unaquatrovirus	Unaquatrovirus	Mccleskeyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Leuconostoc mesenteroides	High-quality	High-quality	97.050	AAI-based (high-confidence)	Unaquatrovirus	Unaquatrovirus LN34	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN552148	Lactococcus phage P1532	29075	35.384	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis	High-quality	High-quality	95.890	AAI-based (high-confidence)	Skunavirus	Skunavirus P1532	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN552149	Lactococcus phage P656	28396	35.075	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis	High-quality	High-quality	93.630	AAI-based (high-confidence)	Skunavirus	Skunavirus P656	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN552150	Lactococcus phage P4565	32697	34.236	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Skunavirus	Skunavirus P4565	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN553583	Pseudomonas phage 4phiC20-2	55941	54.718	Pseudomonas	Group I	Litunavirus	Litunavirus	Migulavirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	Medium-quality	Genome-fragment	76.810	AAI-based (high-confidence)	Litunavirus	Litunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN553584	Pseudomonas phage 4phiC20-2	72474	54.894	Pseudomonas	Group I	Litunavirus	Litunavirus	Migulavirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	Complete	High-quality	100.000	DTR (high-confidence)	Litunavirus	Litunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN553585	Pseudomonas phage 4phiC20-1	42232	62.251	Pseudomonas	Group I	Phikmvvirus	Phikmvvirus	Krylovirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	Complete	High-quality	100.000	DTR (high-confidence)	Phikmvvirus	Phikmvvirus phiKMV	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MN553586	Pseudomonas phage phiKMVC5-4	45446	52.480	Pseudomonas	Group I	Bruynoghevirus	Bruynoghevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	Complete	High-quality	100.000	DTR (high-confidence)	Bruynoghevirus	Bruynoghevirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic