Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN369749Mycobacterium phage MinionDave5802761.496MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus miniondaveThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_40;integrase orf_42;immunity orf_44;cro orf_45
MN369750Streptomyces phage TomSawyer13396149.274StreptomycesGroup I KarimacvirusKarimacvirusBoydwoodruffvirinaeStanwilliamsviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus ATCC 10137CompleteHigh-quality100.000DTR (high-confidence) KarimacvirusKarimacvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN369751Mycobacterium phage TDanisky5627561.233MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.720AAI-based (high-confidence) CheoctovirusCheoctovirus sparkdehlilyThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_45;immunity orf_47;antirepressor orf_48
MN369752Mycobacterium phage Flathead5766361.181MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_38;integrase orf_45;cro orf_48
MN369753Gordonia phage Sukkupi6618466.194GordoniaGroup I SukkupivirusSukkupivirusEmilbogenvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.270AAI-based (high-confidence) SukkupivirusSukkupivirus sukkupiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN369754Streptomyces phage Limpid13103847.556StreptomycesGroup I AnnadreamyvirusAnnadreamyvirusLoccivirinaeStanwilliamsviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces sanglieri UNT16F27ACompleteHigh-quality100.000DTR (high-confidence) AnnadreamyvirusAnnadreamyvirus annadreamyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN369755Mycobacterium phage Minnie5926861.485MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus minnieThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_41;immunity orf_45;antirepressor orf_46;integrase orf_47
MN369756Gordonia phage Anon5266162.509GordoniaGroup I SoupsvirusSoupsvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.640AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateparA orf_33;immunity orf_77
MN369757Streptomyces phage Bordeaux13131749.489StreptomycesGroup I KarimacvirusKarimacvirusBoydwoodruffvirinaeStanwilliamsviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus ATCC 10137CompleteHigh-quality100.000DTR (high-confidence) KarimacvirusKarimacvirus karimacCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN369758Gordonia phage NHagos5958068.216GordoniaGroup I NhagosvirusNhagosvirusDurvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia rubripertincta NRRL B-16540High-qualityHigh-quality97.330AAI-based (high-confidence) NhagosvirusNhagosvirus nhagosThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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