INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MN311493 | Antarctic microvirus TYR_006_V_SP_13 | 5286 | 39.009 | Unspecified | Group II | Alcryvirus | Alcryvirus | Unclassified | Litilviridae | Alpavirales | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Unspecified | High-quality | High-quality | 91.290 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MN313256 | Pseudoalteromonas phage XCL1123 | 45773 | 40.655 | Pseudoalteromonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudoalteromonas marina DSM 17587 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN316588 | Escherichia phage VEc33 | 108640 | 39.109 | Escherichia | Group I | Tequintavirus | Tequintavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 96.120 | AAI-based (high-confidence) | Tequintavirus | Tequintavirus VEc33 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MN317029 | Aeromonas phage vB_AhyS-A18P4 | 60975 | 62.021 | Aeromonas | Group I | Sharonstreetvirus | Sharonstreetvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila A18 | High-quality | High-quality | 99.450 | AAI-based (high-confidence) | Sharonstreetvirus | Sharonstreetvirus A18P4 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN327636 | Pectobacterium phage MA6 | 38553 | 49.083 | Pectobacterium | Group I | Pektosvirus | Pektosvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pectobacterium atrosepticum | High-quality | High-quality | 97.110 | AAI-based (high-confidence) | Pektosvirus | Pektosvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN329673 | Gordonia phage Jabberwocky | 59449 | 67.592 | Gordonia | Group I | Vividuovirus | Vividuovirus | Schenleyvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Vividuovirus | Vividuovirus jabberwocky | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN329674 | Mycobacterium phage JoieB | 65404 | 63.377 | Mycobacterium | Group I | Marvinvirus | Marvinvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.810 | AAI-based (high-confidence) | Marvinvirus | Marvinvirus mosmoris | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN329675 | Microbacterium phage SansAfet | 41531 | 66.716 | Microbacterium | Group I | Dismasvirus | Dismasvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 SEA | High-quality | High-quality | 99.770 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| MN329676 | Mycobacterium phage Poise | 64824 | 63.385 | Mycobacterium | Group I | Marvinvirus | Marvinvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 98.920 | AAI-based (high-confidence) | Marvinvirus | Marvinvirus mosmoris | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MN329677 | Gordonia phage Keitabear | 59759 | 67.299 | Gordonia | Group I | Vividuovirus | Vividuovirus | Schenleyvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae NRRL B-16283 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Vividuovirus | Vividuovirus keitabear | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |