INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MN270265 | Streptococcus phage phi-SsuFJSM8_rum | 33641 | 39.951 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis FJSM8 | Medium-quality | Genome-fragment | 54.670 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN270266 | Streptococcus phage phi-SsuFJZZ32_rum | 73944 | 38.789 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis FJZZ32 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_47 |
| MN270267 | Streptococcus phage phi-SsuFJZZ39_rum | 73944 | 38.789 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis FJZZ39 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_47 |
| MN270268 | Streptococcus phage phi-SsuHCJ31_comEC | 58334 | 39.452 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis HCJ31 | Medium-quality | Genome-fragment | 71.910 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MN270269 | Streptococcus phage phi-SsuHCJ3_rum | 56061 | 39.229 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis HCJ3 | Complete | High-quality | 100.000 | Provirus (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_54 |
| MN270270 | Streptococcus phage phi-SsuJS7_SSU0237 | 47090 | 40.529 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis JS7 | High-quality | High-quality | 94.590 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_50 |
| MN270271 | Streptococcus phage phi-SsuNJ2_rum | 53896 | 39.741 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis NJ2 | Medium-quality | Genome-fragment | 74.600 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_3;integrase orf_58 |
| MN270272 | Streptococcus phage phi-SsuNJ5_rum | 53801 | 39.711 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis NJ5 | Medium-quality | Genome-fragment | 74.550 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_3;integrase orf_57 |
| MN270273 | Streptococcus phage phi-SsuSC05017_rum | 57591 | 39.636 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis SC05017 | Complete | High-quality | 100.000 | Provirus (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_55 |
| MN270274 | Streptococcus phage phi-SsuSH0918_comEC | 49639 | 39.906 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus suis SH0918 | High-quality | High-quality | 97.480 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |