Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN087708Enterobacter phage vB_EhoM-IME52317276339.970EnterobacterGroup I KanagawavirusKanagawavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter hormaecheiHigh-qualityHigh-quality99.820AAI-based (high-confidence) KanagawavirusKanagawavirus eclmCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN090155Escherichia phage vB_EcoS_PHB174893946.897EscherichiaGroup I BaihuvirusBaihuvirusTempevirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality97.120AAI-based (high-confidence) BaihuvirusBaihuvirus PHB17The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MN091625Staphylococcus phage PALS_113877630.105StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality98.110AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN091626Staphylococcus phage PALS_226874825.133StaphylococcusGroup I MadawaskavirusMadawaskavirusWallmarkvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MadawaskavirusMadawaskavirus PALS2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN094788Achromobacter phage Motura22143153.709AchromobacterGroup I MoturavirusMoturavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Achromobacter animicusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MoturavirusMoturavirus moturaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN095770Serratia phage Slocum11243644.826SerratiaGroup I DemerecviridaeUnclassifiedUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia marcescensHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN095771Serratia phage Muldoon16754741.802SerratiaGroup I MuldoonvirusMuldoonvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia marcescensHigh-qualityHigh-quality99.940AAI-based (high-confidence) MuldoonvirusMuldoonvirus muldoonCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN095772Stenotrophomonas phage Moby15936554.137StenotrophomonasGroup I MenderavirusMenderavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas maltophiliaHigh-qualityHigh-quality99.850AAI-based (high-confidence) MenderavirusMenderavirus mobyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN096267Pseudomonas phage vB_PaS_IME3075154556.081PseudomonasGroup I DetrevirusDetrevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_72
MN096355Mycobacterium phage Purky5051366.385MycobacteriumGroup I PurkyvirusPurkyvirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) PurkyvirusPurkyvirus purkyThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_35
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