Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK967398Arthrobacter phage JEGGS5828745.091ArthrobacterGroup I MudcatvirusMudcatvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Arthrobacter sp. ATCC 21022High-qualityHigh-quality100.000AAI-based (high-confidence) MudcatvirusMudcatvirus JEGGSCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK967399Mycobacterium phage Groupthink5057464.011MycobacteriumGroup I MicrowolfvirusMicrowolfvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) MicrowolfvirusMicrowolfvirus purplehazeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_32;immunity orf_70
MK967400Microbacterium Phage Clancy4155563.432MicrobacteriumGroup I IlzatvirusIlzatvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEAHigh-qualityHigh-quality100.000AAI-based (high-confidence) IlzatvirusIlzatvirus ilzatCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK967401Mycobacterium phage Carlyle5122063.647MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.650AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_72
MK967402Mycobacterium phage NihilNomen11043960.820MycobacteriumGroup I OmegavirusOmegavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.520AAI-based (high-confidence) OmegavirusOmegavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_78;immunity orf_91
MK972685Salmonella phage SE104200046.619SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) LederbergvirusLederbergvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_20;antirepressor orf_21;integrase orf_26;cro orf_44
MK972686Salmonella phage SF34201646.613SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) LederbergvirusLederbergvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_17;antirepressor orf_18;integrase orf_23;cro orf_41
MK972687Salmonella phage SE1 (in:P22virus)4200146.618SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) LederbergvirusLederbergvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_10;antirepressor orf_11;integrase orf_16;cro orf_34
MK972688Salmonella phage SI83998846.819SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality98.640AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateantirepressor orf_8;integrase orf_27;integrase orf_41;cro orf_49
MK972689Salmonella phage SF64011546.838SalmonellaGroup I LederbergvirusLederbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_10;integrase orf_24;cro orf_32;antirepressor orf_51
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