INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MK838110 | Aeromonas phage LAh4 | 42002 | 59.271 | Aeromonas | Group I | Ahphunavirus | Ahphunavirus | Melnykvirinae | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 99.580 | AAI-based (high-confidence) | Ahphunavirus | Ahphunavirus LAh1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838111 | Aeromonas phage LAh5 | 41985 | 59.274 | Aeromonas | Group I | Ahphunavirus | Ahphunavirus | Melnykvirinae | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 99.540 | AAI-based (high-confidence) | Ahphunavirus | Ahphunavirus LAh1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838112 | Aeromonas phage LAh_6 | 101390 | 42.311 | Aeromonas | Group I | Lahexavirus | Lahexavirus | Unclassified | Grimontviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Lahexavirus | Lahexavirus LAh6 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838113 | Aeromonas phage LAh_7 | 61426 | 61.972 | Aeromonas | Group I | Sharonstreetvirus | Sharonstreetvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Sharonstreetvirus | Sharonstreetvirus LAh7 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838114 | Aeromonas phage LAh_8 | 97408 | 42.233 | Aeromonas | Group I | Lahexavirus | Lahexavirus | Unclassified | Grimontviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 97.480 | AAI-based (high-confidence) | Lahexavirus | Lahexavirus LAh8 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838115 | Aeromonas phage LAh_9 | 97988 | 42.438 | Aeromonas | Group I | Lahexavirus | Lahexavirus | Unclassified | Grimontviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 98.060 | AAI-based (high-confidence) | Lahexavirus | Lahexavirus LAh9 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK838116 | Aeromonas phage LAh10 | 260310 | 47.484 | Aeromonas | Group I | Ludhianavirus | Ludhianavirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila | High-quality | High-quality | 99.810 | AAI-based (high-confidence) | Ludhianavirus | Ludhianavirus LAh10 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK843319 | Bacillus phage vB_BthS-TP21T | 51949 | 35.496 | Bacillus | Group I | Waukeshavirus | Waukeshavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Waukeshavirus | Waukeshavirus waukesha92 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_18;antirepressor orf_37 |
| MK863032 | Pseudomonas phage Zuri | 75873 | 53.528 | Pseudomonas | Group I | Zurivirus | Zurivirus | Unclassified | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas putida | Complete | High-quality | 100.000 | DTR (high-confidence) | Zurivirus | Zurivirus zuri | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK864263 | Gordonia phage Melba | 48350 | 67.115 | Gordonia | Group I | Jujuvirus | Jujuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 95.480 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | temperate | integrase orf_34;integrase orf_38;immunity orf_40 |