Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP895363Klebsiella phage FKP314227739.556KlebsiellaGroup I JustusliebigvirusJustusliebigvirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae CG258-ST307CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
PP895305Salmonella phage LPSP564301949.618SalmonellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp. LST3CompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP895304Ralstonia phage LPRS204306061.981RalstoniaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearum LRS6CompleteHigh-quality100.000DTR (high-confidence) AmpunavirusAmpunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_49
PP895303Pseudomonas phage LPPA154154250.814PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa LPA102CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
PP895302Listeria phage LPLM204123236.576ListeriaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Listeria monocytogenes LLM1CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateantirepressor orf_39
PP895301Salmonella phage LPST10015788844.554SalmonellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp. LST1CompleteHigh-quality100.000DTR (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP895300Cutibacterium phage LPPA12936553.761CutibacteriumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes LPAC1CompleteHigh-quality100.000DTR (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP895299Cronobacter phage LPCS3917943944.836CronobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cronobacter sakazakii LCS6High-qualityHigh-quality100.000AAI-based (high-confidence) PseudotevenvirusPseudotevenvirus lebCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP895211Xylella phage vB_Xf_IVIA-DoCa211491347.509XylellaGroup I TectiviridaeUnclassifiedUnclassifiedTectiviridaeKalamaviralesTectiliviricetesPreplasmiviricotaBamfordviraeVaridnaviria Xylella fastidiosaCompleteHigh-quality100.000ITR (high-confidence) AlphatectivirusAlphatectivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP895210Xylella phage vB_Xf_IVIA-DoCa191481448.279XylellaGroup I TectiviridaeUnclassifiedUnclassifiedTectiviridaeKalamaviralesTectiliviricetesPreplasmiviricotaBamfordviraeVaridnaviria Xylella fastidiosaHigh-qualityHigh-quality99.090AAI-based (high-confidence) AlphatectivirusAlphatectivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
Previous Page 591 of 3635 Next