Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP944330Pseudomonas phage phi_M66133864.471PseudomonasGroup I YuavirusYuavirusRabinowitzvirinaeMesyanzhinovviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality99.950AAI-based (high-confidence) YuavirusYuavirus M6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP944329Pseudomonas phage phi_D35642757.873PseudomonasGroup I YuavirusYuavirusRabinowitzvirinaeMesyanzhinovviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) DetrevirusDetrevirus D3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_33
PP942979Erwinia phage phB7826182449.345ErwiniaGroup I AlexandravirusAlexandravirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovora Ea102High-qualityHigh-quality98.810AAI-based (high-confidence) AlexandravirusAlexandravirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP942118Plectonema phage PP-DH224265346.358PlectonemaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leptolyngbya boryana FACHB-402 (synonym: Plectonema boryanum FACHB-402)High-qualityHigh-quality98.620AAI-based (high-confidence) WumptrevirusWumptrevirus PPCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP942088Salmonella phage vB_SenS_Jbel16556635.483SalmonellaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality98.430AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP941779Salmonella phage vB_Sen_TUMS_E311945839.359SalmonellaGroup I TequintavirusTequintavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Enteritidis ATCC 13076CompleteHigh-quality100.000DTR (high-confidence) TequintavirusTequintavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PP938272Bacillus phage PHBA67-T6327037.258BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus cereusCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_68
PP935708Campylobacter phage vB_CJ12660_3PH1233967927.397CampylobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Campylobacter jejuni NCTC 12660Low-qualityGenome-fragment42.570HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
PP935707Salmonella phage vB_SE127_1PH1234254849.850SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Enteritidis P125263High-qualityHigh-quality99.300AAI-based (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP935706Salmonella phage vB_SE130_2P16464249.916SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Enteritidis P125088High-qualityHigh-quality100.000AAI-based (high-confidence) JerseyvirusJerseyvirus AG11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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