Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP965501Acinetobacter phage AB_SZL34439837.914AcinetobacterGroup I ObolenskvirusObolenskvirusUnclassifiedHirszfeldviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii NAB01BHigh-qualityHigh-quality98.760AAI-based (high-confidence) BurnvirusBurnvirus Aba01The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PP965177Bacillus phage KoopaTroopa17059034.377BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis serovar kurstakiCompleteHigh-quality100.000DTR (high-confidence) TsamsavirusTsamsavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_256
PP954958Klebsiella phage KpTRp14800348.795KlebsiellaGroup I JedunavirusJedunavirusJameshumphriesvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae K2CompleteHigh-quality100.000DTR (high-confidence) SircambvirusSircambvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PP954862Pseudomonas phage Oiolarie2732653.586PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas taiwanensisMedium-qualityGenome-fragment59.410AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP954861Pseudomonas phage Lebethron4490958.866PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas taiwanensisHigh-qualityHigh-quality99.870AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP954860Escherichia phage Halfdan_Juelich_variant4285753.679EscherichiaGroup I HalfdanvirusHalfdanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas taiwanensisHigh-qualityHigh-quality100.000AAI-based (high-confidence) HalfdanvirusHalfdanvirus halfdanCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP954859Pseudomonas phage Alpheus4568457.747PseudomonasGroup I NerthusvirusNerthusvirusColwellvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas taiwanensisHigh-qualityHigh-quality98.810AAI-based (high-confidence) NerthusvirusNerthusvirus alpheusCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP952734Klebsiella phage phi1_0660624051752.820KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP952733Escherichia phage vB_EcoM_H128763938.835EscherichiaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality99.520AAI-based (high-confidence) FelixounavirusFelixounavirus vipecohospiiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP952070Staphylococcus phage Pel535366043.874StaphylococcusGroup I CleopatravirinaeUnclassifiedCleopatravirinaeChaseviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus hyicusHigh-qualityHigh-quality100.000AAI-based (high-confidence) CarltongylesvirusCarltongylesvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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