Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PQ140450Enterobacter phage vB_EluM_RZH17419739.466EnterobacterGroup I KaramvirusKaramvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter ludwigiiCompleteHigh-quality100.000DTR (high-confidence) KaramvirusKaramvirus RZHCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ139366Salmonella phage Ijeoma4174749.886SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Typhi SPO1High-qualityHigh-quality97.430AAI-based (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ139365Salmonella phage Ayanbimpe3960150.751SalmonellaGroup I ApdecimavirusApdecimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Typhi SPO1High-qualityHigh-quality99.070AAI-based (high-confidence) ApdecimavirusApdecimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ136553Vibrio phage VPK84286649.365VibrioGroup I MaculvirusMaculvirusUnclassifiedAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus PSU5124CompleteHigh-quality100.000DTR (high-confidence) MaculvirusMaculvirus HA1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ133628Klebsiella phage PQ72544083553.283KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ133627Klebsiella phage PQ51044380353.887KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) DrulisvirusDrulisvirus ZX11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ133626Klebsiella phage PA45-94448751.889KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) GansuvirusGansuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ133625Klebsiella phage P873414665144.686KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) MydovirusMydovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PQ133624Klebsiella phage P7a4842751.075KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeHigh-qualityHigh-quality97.750AAI-based (high-confidence) WebervirusWebervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ133623Klebsiella phage P76413882248.859KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_24
Previous Page 545 of 3635 Next