INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ688785 | Pseudomonas phage vB_Pa01S_KP1 | 61663 | 64.492 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa PAO1 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ688784 | Pseudomonas phage vB_Pa1307P_KP6 | 40864 | 61.856 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa C1307 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_44 | |||
| PZ688783 | Pseudomonas phage vB_Pa1204S_KP3 | 94482 | 55.237 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa C1204 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_41 | |||
| PZ688782 | Pseudomonas phage vB_Pa1203S_KP4 | 94482 | 55.235 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa C1203 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_29 | |||
| PZ688781 | Pseudomonas phage vB_Pa1188M_KP5 | 94482 | 55.233 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa C1188 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_92 | |||
| PZ688780 | Escherichia phage vB_EcNRGM_KP2 | 40923 | 47.115 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli NRG473 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | cro orf_16;integrase orf_35;antirepressor orf_40 | |||
| PZ687455 | Klebsiella phage Henu-K20025 | 44098 | 53.862 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae K408 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ686473 | Klebsiella phage RHTM-01 | 114112 | 45.466 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae | High-quality | High-quality | 99.930 | AAI-based (high-confidence) | lytic | ||||
| PZ686391 | Pseudomonas phage vB_PaP_DMTU_2 | 43197 | 62.282 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | Phikmvvirus | Phikmvvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ686256 | Bacillus phage SCM10 | 50133 | 36.734 | Bacillus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacillus paranthracis SCM10-01 | High-quality | High-quality | 99.330 | AAI-based (high-confidence) | Bembunaquatrovirus | Bembunaquatrovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_35;integrase orf_69 |