Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PQ311674Staphylococcus phage CIFT_MFB_MRSA1214119329.934StaphylococcusGroup I SilviavirusSilviavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusCompleteHigh-quality100.000DTR (high-confidence) SilviavirusSilviavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ311673Klebsiella phage vB_KpnP_ZX224506553.813KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 111-2CompleteHigh-quality100.000DTR (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ310662Escherichia phage Mimir1247276843.145EscherichiaGroup I GamaleyavirusGamaleyavirusEnquatrovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli UPEC124CompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus mimir124Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ309151Ralstonia phage RsoM3USA22563851.798RalstoniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Ralstonia solanacearumHigh-qualityHigh-quality100.000AAI-based (high-confidence) ChiangmaivirusChiangmaivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ308734Klebsiella phage vB_Kp_Z14682745.617KlebsiellaGroup I GajwadongvirusGajwadongvirusUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae Kp677CompleteHigh-quality100.000DTR (high-confidence) GajwadongvirusGajwadongvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ306799Salmonella phage vB_CECAV_05015246549.001SalmonellaGroup I AgtrevirusAgtrevirusAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar CopenhagenHigh-qualityHigh-quality96.490AAI-based (high-confidence) AgtrevirusAgtrevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PQ306574Escherichia phage vB_EcoM_PTE-Eco0916755440.428EscherichiaGroup I KrischvirusKrischvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) KrischvirusKrischvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ306573Escherichia phage vB_EcoM_PTE-Eco0516859937.594EscherichiaGroup I StraboviridaeUnclassifiedUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality99.260AAI-based (high-confidence) MosigvirusMosigvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ306550Klebsiella phage KSKp16710139.669KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ATCC 700603High-qualityHigh-quality98.980AAI-based (high-confidence) JiaodavirusJiaodavirus jd18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ306544Pseudomonas phage vB_PaeS_BEH489IMT385820763.623PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa 25619High-qualityHigh-quality95.320AAI-based (high-confidence) AbidjanvirusAbidjanvirus Ab18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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