INPHARED2 - BMCPR

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PQ579973	Escherichia phage MirsaeidiM_Esher4	44409	50.789	Escherichia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Kagunavirus	Kagunavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PQ572755	Escherichia phage CAU_ECP01	169126	37.666	Escherichia	Group I	Straboviridae	Unclassified	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O157:H7 ATCC 43984, ATCC 43895	High-quality	High-quality	99.670	AAI-based (high-confidence)	Mosigvirus	Mosigvirus utam	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ571310	Thomasclavelia phage TR-TP2	101107	29.820	Thomasclavelia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Thomasclavelia ramosa YY17	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_9;antirepressor orf_13;integrase orf_126
PQ571309	Thomasclavelia phage TR-TP1	89662	30.334	Thomasclavelia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Thomasclavelia ramosa YY17	Medium-quality	Genome-fragment	87.760	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	antirepressor orf_115;integrase orf_119
PQ571308	Shigella phage SF2-1	167938	35.489	Shigella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Shigella flexneri SM3	High-quality	High-quality	99.830	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ571307	Shigella phage SF1-1	145957	38.903	Shigella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Shigella flexneri SB2	Complete	High-quality	100.000	DTR (high-confidence)	Phapecoctavirus	Phapecoctavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ571306	Shigella phage phiSD1	42072	50.689	Shigella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Shigella dysenteriae X12	Complete	High-quality	100.000	DTR (high-confidence)	Kagunavirus	Kagunavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PQ571305	Streptococcus phage SA-TP2	42736	41.141	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus salivarius DBO_AE_2	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_10;antirepressor orf_19
PQ571304	Streptococcus phage SA-TP1	10518	37.136	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus salivarius DBO_AE_2	Complete	High-quality	100.000	DTR (medium-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_3
PQ571303	Ruminococcus phage RG-TP1	36030	42.517	Ruminococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mediterraneibacter gnavus (Ruminococcus gnavus) DB_YZ_1	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	antirepressor orf_50