Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PQ826431Escherichia phage pCABI-SEA00115110638.967EscherichiaGroup I PhapecoctavirusPhapecoctavirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) PhapecoctavirusPhapecoctavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ824572Klebsiella phage KPP10511314345.546KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeHigh-qualityHigh-quality99.080AAI-based (high-confidence) SugarlandvirusSugarlandvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ824533Vibrio phage BH21-A17930948.796VibrioGroup I MardecavirusMardecavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus JK21CompleteHigh-quality100.000DTR (high-confidence) MardecavirusMardecavirus SSP002The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PQ824399Aeromonas phage vB_AroA_KFSA93978553.068AeromonasGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas hydrophila SNUFPCA9High-qualityHigh-quality99.620AAI-based (high-confidence) EbriosvirusEbriosvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ824230Enterobacter phage vB_Ecl_id449617241339.810EnterobacterGroup I KaramvirusKaramvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacae SRM004CompleteHigh-quality100.000DTR (high-confidence) KaramvirusKaramvirus id4496Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ821891Pseudomonas phage WCHPA-P24340062.926PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) HarrisonburgvirusHarrisonburgvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ821890Proteus phage ABTNLPp215839436.974ProteusGroup I GelderlandvirusGelderlandvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Proteus mirabilisHigh-qualityHigh-quality94.180AAI-based (high-confidence) GelderlandvirusGelderlandvirus melvilleCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ821741Escherichia phage S114086748.626EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) TeseptimavirusTeseptimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ821707Providencia phage MTT4198842.143ProvidenciaGroup I KakivirusKakivirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia sp. (Ewing)High-qualityHigh-quality99.850AAI-based (high-confidence) KakivirusKakivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ821648Mycobacterium phage ZM25540267.084MycobacteriumGroup I GilesvirusGilesvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) GilesvirusGilesvirus ZM2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_3
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