Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV231355Caulobacter phage RBC1122301365.984CaulobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Caulobacter vibrioides CB15High-qualityHigh-quality99.480AAI-based (high-confidence) PoindextervirusPoindextervirus rogueCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_140
PV231354Caulobacter phage RBC822327065.979CaulobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Caulobacter vibrioides CB15CompleteHigh-quality100.000DTR (high-confidence) PoindextervirusPoindextervirus rogueCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_138
PV231353Caulobacter phage RBC5720841465.998CaulobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Caulobacter vibrioides CB15High-qualityHigh-quality92.490AAI-based (high-confidence) ShapirovirusShapirovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_66;integrase orf_184;integrase orf_313
PV231352Caulobacter phage RBC6322318065.980CaulobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Caulobacter vibrioides CB15High-qualityHigh-quality99.570AAI-based (high-confidence) PoindextervirusPoindextervirus rogueCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_138
PV231330Klebsiella phage KX14525054.004KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae ATCC 700603CompleteHigh-quality100.000DTR (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV224507Stenotrophomonas phage vB_SmaS_YA14305559.965StenotrophomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas maltophilia 047High-qualityHigh-quality99.910AAI-based (high-confidence) SmasvirusSmasvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV211014Roseobacter phage CRP-8313097351.939RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter sp. FZCC0196High-qualityHigh-quality94.160AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV211013Roseobacter phage CRP-8232933152.102RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter sp. FZCC0197Medium-qualityGenome-fragment88.460AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV211012Roseobacter phage CRP-8223026052.422RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter sp. FZCC0197High-qualityHigh-quality92.060AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV211011Roseobacter phage CRP-8213026052.419RoseobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter sp. FZCC0197High-qualityHigh-quality91.950AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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