Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV340542Escherichia phage mEp5064012850.122EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality100.000AAI-based (high-confidence) WongtaivirusWongtaivirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_16
PV340541Escherichia phage mEp3324620650.279EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality98.500AAI-based (high-confidence) RadostvirusRadostvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_16;cro orf_17
PV340540Escherichia phage mEp2353759950.015EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality96.760AAI-based (high-confidence) NochtlivirusNochtlivirus mEp235Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;cro orf_13;antirepressor orf_14
PV340539Escherichia phage mEp2344080449.703EscherichiaGroup I WanchaivirusWanchaivirusHendrixvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality100.000AAI-based (high-confidence) WanchaivirusWanchaivirus mEp234The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_17;antirepressor orf_18
PV340538Escherichia phage mEp2134412450.972EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality100.000AAI-based (high-confidence) AguilavirusAguilavirus mEp213The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;antirepressor orf_27
PV340537Escherichia phage mEp0434288050.805EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality98.800AAI-based (high-confidence) AguilavirusAguilavirus mEp043Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;antirepressor orf_23
PV340536Escherichia phage Lambda4850749.873EscherichiaGroup I LambdavirusLambdavirusJacobvirinaeZimmerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli str. K-12 substr. MG1655High-qualityHigh-quality100.000AAI-based (high-confidence) LambdavirusLambdavirus lambdaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_18;cro orf_19
PV335312Vibrio phage M03-27Vpp7939248.196VibrioGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticusHigh-qualityHigh-quality96.520AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV330115Enterococcus phage phiEFM141953734.826EnterococcusGroup I MinhovirusMinhovirusSarlesvirinaeRountreeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecium ATCC 19434High-qualityHigh-quality100.000AAI-based (high-confidence) MinhovirusMinhovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV330114Enterococcus phage phiEFM131953834.819EnterococcusGroup I MinhovirusMinhovirusSarlesvirinaeRountreeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecium ATCC 19434High-qualityHigh-quality100.000AAI-based (high-confidence) MinhovirusMinhovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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