INPHARED2 - BMCPR

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PV340552	Escherichia phage PhiR12_3	61979	50.030	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli ECOR13	High-quality	High-quality	93.720	AAI-based (high-confidence)	Oslovirus	Oslovirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;antirepressor orf_12;antirepressor orf_24;cro orf_26;cro orf_27
PV340551	Escherichia phage PhiR12_2_star	52198	50.944	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli C	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_4;cro orf_24;cro orf_25;antirepressor orf_35
PV340550	Escherichia phage PhiR12_2	51886	51.016	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_4;cro orf_24;cro orf_25;antirepressor orf_35
PV340549	Escherichia phage PhiR12_1	54435	50.738	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_4;cro orf_24;cro orf_25;antirepressor orf_35
PV340548	Escherichia phage PhiR11_1_star	50509	49.771	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli ECOR13	Complete	High-quality	100.000	DTR (high-confidence)	Nesevirus	Nesevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	cro orf_20;cro orf_21
PV340547	Escherichia phage PhiR11_1	49016	49.651	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	Nesevirus	Nesevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_19;cro orf_20
PV340546	Escherichia phage PhiR5_2	61526	50.154	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	93.500	AAI-based (high-confidence)	Diegovirus	Diegovirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_14;cro orf_15;antirepressor orf_25;antirepressor orf_68
PV340545	Escherichia phage PhiR5_1	50981	51.198	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli C	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_1
PV340544	Escherichia phage mEpX2	38763	50.076	Escherichia	Group I	Shamshuipovirus	Shamshuipovirus	Hendrixvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	97.650	AAI-based (high-confidence)	Shamshuipovirus	Shamshuipovirus mEpX2	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_16;antirepressor orf_17
PV340543	Escherichia phage mEpX1	41572	49.310	Escherichia	Group I	Cuauhtlivirus	Cuauhtlivirus	Hendrixvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	100.000	AAI-based (high-confidence)	Cuauhtlivirus	Cuauhtlivirus mEpX1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;antirepressor orf_18