Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV784032Klebsiella phage Kp10Bj_LN54_1416761539.526KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella sp.High-qualityHigh-quality99.070AAI-based (high-confidence) JiaodavirusJiaodavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV784031Klebsiella phage Kp2Bj_LN294_M2317056740.713KlebsiellaGroup I MarfavirusMarfavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella sp.High-qualityHigh-quality99.340AAI-based (high-confidence) MarfavirusMarfavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV784030Klebsiella phage Kp1Bj_HH11_M2317056840.695KlebsiellaGroup I MarfavirusMarfavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella sp.High-qualityHigh-quality99.340AAI-based (high-confidence) MarfavirusMarfavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV780768Enterococcus phage vB_Efas_LOK14117634.802EnterococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Enterococcus faecalis (clinical isolate)CompleteHigh-quality100.000DTR (high-confidence) EfquatrovirusEfquatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_64
PV780767Leuconostoc phage phiLM33_018162333.476LeuconostocUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Leuconostoc mesenteroides WIKIM 33High-qualityHigh-quality94.990AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV779719Yersinia phage vB-Yen-24YE000644975745.971YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia enterocolitica 24-YE00064CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1
PV779201Leuconostoc phage phiLM0121_032930736.223LeuconostocUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Leuconostoc mesenteroides WIKIM 0121High-qualityHigh-quality100.000AAI-based (high-confidence) UnaquatrovirusUnaquatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV778520Escherichia phage RCIP03595954144.581EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality99.900AAI-based (high-confidence) SeuratvirusSeuratvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV775413Escherichia phage vB_Eco_Sem24424444.969EscherichiaGroup I VectrevirusVectrevirusMolineuxvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Eschercihia coli (multidrug-resistant clinical isolate)High-qualityHigh-quality99.180AAI-based (high-confidence) VectrevirusVectrevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV775412Staphylococcus phage EMS22-213788130.401StaphylococcusGroup I KayvirusKayvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus ATCC 25923CompleteHigh-quality100.000DTR (high-confidence) KayvirusKayvirus G1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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