Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX651400Salmonella phage vB_SEn_PH3533993149.914SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX651399Salmonella phage vB_SEn_Bv00034316149.950SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX646973Limosilactobacillus phage LFP024378946.064LimosilactobacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Limosilactobacillus fermentumHigh-qualityHigh-quality96.360AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperatecro orf_42;cro orf_43;integrase orf_46;integrase orf_50
PX646905Limosilactobacillus phage LFP033955646.084LimosilactobacillusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Limosilactobacillus fermentumHigh-qualityHigh-quality92.840AAI-based (high-confidence) LacfervirusLacfervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX645697Escherichia phage vB_EcoP_ZCEC167736242.105EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) KuravirusKuravirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX645604Salmonella phage GRNsp014180249.632SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Gallinarum GXC180701High-qualityHigh-quality97.640AAI-based (high-confidence) JerseyvirusJerseyvirus SHWT1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX645529Salmonella phage GRNsp0916327035.669SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Enteritidis JSC160603High-qualityHigh-quality96.930AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX641096Klebsiella phage vB_kpnP_ZB275048650.608KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae Kp202High-qualityHigh-quality100.000AAI-based (high-confidence) WebervirusWebervirus 1086Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX630760Salmonella phage EDA034277049.888SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisHigh-qualityHigh-quality99.690AAI-based (medium-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX630759Salmonella phage EDA054021948.221SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisHigh-qualityHigh-quality100.000AAI-based (high-confidence) BerlinvirusBerlinvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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