Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN988527Rhizobium phage RHph_N3_196865642.633RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli N3_19High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988526Rhizobium phage RHph_N3_24306157.927RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli N3_2High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_26
MN988525Rhizobium phage RHph_Y6520682141.174RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli INC1-2High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus Y65Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988524Rhizobium phage RHph_TM3_3_620678841.101RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli T3_6High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988523Rhizobium phage RHph_TM2_3B20625341.113RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli T2_3High-qualityHigh-quality99.870AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988522Rhizobium phage RHph_TM4020743141.045RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium leg. CIAT894High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988521Rhizobium phage RHph_TM3020762341.049RhizobiumGroup I CuauhnahuacvirusCuauhnahuacvirusUnclassifiedKleczkowskaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. N941High-qualityHigh-quality100.000AAI-based (high-confidence) CuauhnahuacvirusCuauhnahuacvirus TM30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988520Rhizobium phage RHph_I915414348.495RhizobiumGroup I TrinifflemingvirusTrinifflemingvirusStaniewskivirinaePootjesviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. R635High-qualityHigh-quality99.450AAI-based (high-confidence) TrinifflemingvirusTrinifflemingvirus I19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988519Rhizobium phage RHph_I1_1817097847.503RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli I1_18High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_256
MN988518Rhizobium phage RHph_N2_10601058.719RhizobiumGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Rhizobium phaseoli N2_10High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
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