Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MN988537Rhizobium phage RHph_TM3_3_106784256.490RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli T3_10High-qualityHigh-quality97.730AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988536Rhizobium phage RHph_N654868260.753RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli INC1-2High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_14
MN988535Rhizobium phage RHph_N4219345253.439RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli IE4771High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988534Rhizobium phage RHph_N3415381148.957RhizobiumGroup I TrinifflemingvirusTrinifflemingvirusStaniewskivirinaePootjesviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli CFN42High-qualityHigh-quality99.240AAI-based (high-confidence) TrinifflemingvirusTrinifflemingvirus N34Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988533Rhizobium phage RHph_N24419459.094RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli N741High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_26
MN988532Rhizobium phage RHph_I1_915420648.494RhizobiumGroup I TrinifflemingvirusTrinifflemingvirusStaniewskivirinaePootjesviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium sp. I1_9High-qualityHigh-quality99.490AAI-based (high-confidence) TrinifflemingvirusTrinifflemingvirus I19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988531Rhizobium phage RHph_Y5A6942157.265RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli N161High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MN988530Rhizobium phage RHph_N175431756.132RhizobiumGroup I KleczkowskavirusKleczkowskavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli R630High-qualityHigh-quality100.000AAI-based (high-confidence) KleczkowskavirusKleczkowskavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988529Rhizobium phage RHph_I384669549.149RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli BRASIL5High-qualityHigh-quality100.000AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHphI38Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MN988528Rhizobium phage RHph_N374645049.277RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium phaseoli KIM5High-qualityHigh-quality100.000AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHphN37Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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