INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MT679223 | Proteus phage 1 | 102298 | 38.313 | Proteus | Group I | Novosibvirus | Novosibvirus | Unclassified | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Proteus mirabilis H10.20 | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | Novosibvirus | Novosibvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT679222 | Proteus phage 2 | 102041 | 38.328 | Proteus | Group I | Novosibvirus | Novosibvirus | Unclassified | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Proteus mirabilis 3b10_21 | High-quality | High-quality | 99.490 | AAI-based (high-confidence) | Novosibvirus | Novosibvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT679221 | Proteus phage 7 | 242444 | 48.503 | Proteus | Group I | Seoulvirus | Seoulvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Proteus mirabilis 3b10_21 | High-quality | High-quality | 98.670 | AAI-based (high-confidence) | Seoulvirus | Seoulvirus SPN3US | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT677934 | Salmonella phage NBSal007 | 43747 | 49.809 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica AR 404 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus NBSal007 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT677933 | Salmonella phage NBSal006 | 41850 | 49.795 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica AR 404 | High-quality | High-quality | 97.570 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus NBSal006 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT675126 | Providencia phage vB_PreS-PatoteraRojo | 60728 | 49.420 | Providencia | Group I | Redjacvirus | Redjacvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Providencia rettgeri B0142 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Redjacvirus | Redjacvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT675125 | Providencia phage vB_PreS-Stilesk | 60924 | 49.470 | Providencia | Group I | Redjacvirus | Redjacvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Providencia rettgeri B0142 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Redjacvirus | Redjacvirus stilesk | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT675124 | Providencia phage vB_PreS-PibeRecoleta | 60727 | 49.270 | Providencia | Group I | Redjacvirus | Redjacvirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Providencia rettgeri B0142 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Redjacvirus | Redjacvirus piberecoleta | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT670422 | Pseudomonas phage phiPsa397 | 98951 | 47.725 | Pseudomonas | Group I | Otagovirus | Otagovirus | Gorskivirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. actinidiae | Complete | High-quality | 100.000 | DTR (high-confidence) | Otagovirus | Otagovirus psa397 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MT670421 | Pseudomonas phage phiPsa381 | 98800 | 47.809 | Pseudomonas | Group I | Otagovirus | Otagovirus | Gorskivirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. actinidiae | Complete | High-quality | 100.000 | DTR (high-confidence) | Otagovirus | Otagovirus psa381 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |