INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT701595	Streptomyces phage Shaeky	45617	62.602	Streptomyces	Group I	Shaekyvirus	Shaekyvirus	Unclassified	Colingsworthviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Shaekyvirus	Shaekyvirus shaeky	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT701594	Streptomyces phage Spernnie	50834	65.694	Streptomyces	Group I	Sentinelvirus	Sentinelvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sentinelvirus	Sentinelvirus spernnie	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	immunity orf_24;integrase orf_48
MT701593	Streptomyces phage Sycamore	44694	62.680	Streptomyces	Group I	Sycamorevirus	Sycamorevirus	Unclassified	Colingsworthviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces sp.	High-quality	High-quality	99.170	AAI-based (high-confidence)	Sycamorevirus	Sycamorevirus sycamore	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_56
MT701592	Klebsiella phage Solomon	51775	47.925	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella aerogenes	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus solomon	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT701591	Burkholderia phage Mana	38038	64.315	Burkholderia	Group I	Aptresvirus	Aptresvirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Burkholderia gladioli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Aptresvirus	Aptresvirus mana	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_44
MT701590	Klebsiella phage Miami	253383	43.947	Klebsiella	Group I	Miamivirus	Miamivirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Miamivirus	Miamivirus miami	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT701589	Klebsiella phage Pone	44346	53.847	Klebsiella	Group I	Drulisvirus	Drulisvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Drulisvirus	Drulisvirus Pone	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT701588	Klebsiella phage Metamorpho	171475	38.512	Klebsiella	Group I	Jiaodavirus	Jiaodavirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella aerogenes	High-quality	High-quality	100.000	AAI-based (high-confidence)	Jiaodavirus	Jiaodavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT701587	Burkholderia phage Magia	44942	65.062	Burkholderia	Group I	Magiavirus	Magiavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Burkholderia cenocepacia	High-quality	High-quality	100.000	AAI-based (high-confidence)	Magiavirus	Magiavirus magia	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_36
MT701586	Burkholderia phage Mica	43707	62.153	Burkholderia	Group I	Micavirus	Micavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Burkholderia cenocepacia	High-quality	High-quality	99.370	AAI-based (high-confidence)	Micavirus	Micavirus Mica	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_27