INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW960030	Rhizobium phage RHph_X66	120445	59.430	Rhizobium	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	R. phaseoli sv. phaseoli INC 2-5	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_3
MW960029	Rhizobium phage RHph_X94	6034	58.402	Rhizobium	Group II	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Microviricetes	Phixviricota	Sangervirae	Floreoviria	R. phaseoli GR75	High-quality	High-quality	100.000	AAI-based (medium-confidence)	New_genus	New_species	No hits were found with the default settings	unknown
MW934263	Stenotrophomonas phage BUCT603	44912	63.680	Stenotrophomonas	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Stenotrophomonas maltophilia 118	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MW929182	Escherichia phage FS2B	58790	42.364	Escherichia	Group I	Kuravirus	Kuravirus	Gordonclarkvirinae	Mtkvariviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli PB2	Medium-quality	Genome-fragment	77.100	AAI-based (high-confidence)	Kuravirus	Kuravirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW929175	Pseudomonas phage K4	50358	44.632	Pseudomonas	Group I	Paundecimvirus	Paundecimvirus	Unclassified	Zobellviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	Complete	High-quality	100.000	DTR (high-confidence)	Paundecimvirus	Paundecimvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW927525	Paenibacillus phage Sneaky	39668	42.034	Paenibacillus	Group I	Fernvirus	Fernvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae ATCC 9545	High-quality	High-quality	98.880	AAI-based (high-confidence)	Fernvirus	Fernvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;antirepressor orf_35;antirepressor orf_40
MW927524	Paenibacillus phage Riker	39482	41.444	Paenibacillus	Group I	Fernvirus	Fernvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae ATCC 9545	High-quality	High-quality	98.660	AAI-based (high-confidence)	Fernvirus	Fernvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_33;antirepressor orf_37;antirepressor orf_43
MW927523	Paenibacillus phage Picard	39416	41.788	Paenibacillus	Group I	Fernvirus	Fernvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae ATCC 9545	High-quality	High-quality	98.210	AAI-based (high-confidence)	Fernvirus	Fernvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_32;antirepressor orf_36;antirepressor orf_40
MW927522	Paenibacillus phage Pahemo	42027	42.311	Paenibacillus	Group I	Fernvirus	Fernvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae ATCC 9545	High-quality	High-quality	100.000	AAI-based (high-confidence)	Fernvirus	Fernvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;antirepressor orf_35;antirepressor orf_40
MW927521	Paenibacillus phage Norbert	39482	41.442	Paenibacillus	Group I	Fernvirus	Fernvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae ATCC 9545	High-quality	High-quality	98.660	AAI-based (high-confidence)	Fernvirus	Fernvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_33;antirepressor orf_37;antirepressor orf_43