Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW965453Ralstonia phage vB_RsoP_BMB504366561.791RalstoniaGroup I HongshanvirusHongshanvirusOkabevirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearum RS3220-1High-qualityHigh-quality100.000AAI-based (high-confidence) HongshanvirusHongshanvirus BMB50Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960043Stenotrophomonas phage BUCT6094314558.285StenotrophomonasGroup I MaltophvirusMaltophvirusGujervirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas maltophiliaHigh-qualityHigh-quality100.000AAI-based (high-confidence) MaltophvirusMaltophvirus BUCT609Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960038Rhizobium phage RHph_X3_157618545.090RhizobiumGroup I SchitoviridaeUnclassifiedUnclassifiedSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X3_15High-qualityHigh-quality99.890AAI-based (high-confidence) XoxocotlavirusXoxocotlavirus X228BCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960037Rhizobium phage RHph_X2_266852259.131RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_26High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW960036Rhizobium phage RHph_X2_28B7635945.073RhizobiumGroup I XoxocotlavirusXoxocotlavirusUnclassifiedSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_28BHigh-qualityHigh-quality100.000AAI-based (high-confidence) XoxocotlavirusXoxocotlavirus X228BCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960035Rhizobium phage RHph_X92605459.861RhizobiumGroup II FaseolivirusFaseolivirusUnclassifiedChicoviridaeSecretviralesMicroviricetesPhixviricotaSangerviraeFloreoviria R. phaseoli sv. phaseoli GR14High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MW960034Rhizobium phage RHph_X3_94489656.119RhizobiumGroup I YautepecvirusYautepecvirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X3_9High-qualityHigh-quality98.350AAI-based (high-confidence) YautepecvirusYautepecvirus RHphX39Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW960033Rhizobium phage RHph_X3_25559758.922RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X3_2High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MW960032Rhizobium phage RHph_X2_256875758.909RhizobiumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_25High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_32;integrase orf_47
MW960031Rhizobium phage RHph_X2_245568951.358RhizobiumGroup I RigallicvirusRigallicvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium americanum X2_24High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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