INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MZ398246	Escherichia phage IME178	108588	38.783	Escherichia	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	96.090	AAI-based (high-confidence)	Tequintavirus	Tequintavirus IME178	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MZ398245	Klebsiella phage IME183	41384	52.921	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Przondovirus	Przondovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398244	Klebsiella phage IME184	44598	50.253	Klebsiella	Group I	Ulipvirus	Ulipvirus	Molineuxvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ulipvirus	Ulipvirus IME184	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398243	Escherichia phage IME267	76631	41.983	Escherichia	Group I	Suseptimavirus	Suseptimavirus	Gordonclarkvirinae	Mtkvariviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Suseptimavirus	Suseptimavirus IME267	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398242	Klebsiella phage IME268	49552	50.450	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus IME268	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398241	Stenotrophomonas phage BUCT626	61662	56.193	Stenotrophomonas	Group I	Bixiavirus	Bixiavirus	Beaumontvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Stenotrophomonas maltophilia	High-quality	High-quality	99.540	AAI-based (high-confidence)	Bixiavirus	Bixiavirus BUCT626	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398240	Stenotrophomonas phage BUCT627	61860	56.279	Stenotrophomonas	Group I	Bixiavirus	Bixiavirus	Beaumontvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Stenotrophomonas maltophilia	High-quality	High-quality	99.840	AAI-based (high-confidence)	Bixiavirus	Bixiavirus BUCT627	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ398021	Klebsiella phage BUCT_47333	47333	49.160	Klebsiella	Group I	Ringroadvirus	Ringroadvirus	Jameshumphriesvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	97.540	AAI-based (high-confidence)	Ringroadvirus	Ringroadvirus BUCT47333	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MZ394712	Escherichia phage U1G	73275	42.953	Escherichia	Group I	Gamaleyavirus	Gamaleyavirus	Enquatrovirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Colistin resistant Escherichia coli clinical isolate U1007	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gamaleyavirus	Gamaleyavirus U1g	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MZ388556	Gordonia phage Nithya	61092	51.326	Gordonia	Group I	Kenoshavirus	Kenoshavirus	Deejayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kenoshavirus	Kenoshavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic