INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028656 | Enterobacteria phage VT2phi_272 | 65955 | 50.104 | Enterobacteria | Group I | Oslovirus | Oslovirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O157:H7 strain 71074 | High-quality | High-quality | 99.990 | AAI-based (high-confidence) | temperate | integrase orf_1;integrase orf_2;antirepressor orf_8;antirepressor orf_13;antirepressor orf_33;cro orf_36;cro orf_37;antirepressor orf_55 | |||
| NC_028655 | Yersinia phage vB_YenP_AP10 | 39235 | 51.757 | Yersinia | Group I | Apdecimavirus | Apdecimavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica 6471/76-c serotype O:3 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028654 | Mycobacterium phage Sparkdehlily | 56275 | 61.235 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.730 | AAI-based (high-confidence) | temperate | integrase orf_45;immunity orf_47;antirepressor orf_48 | |||
| NC_028653 | Gordonia phage GTE8 | 67617 | 65.957 | Gordonia | Group I | Foxborovirus | Foxborovirus | Emilbogenvirinae | Zierdtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae strain G232 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028652 | Pseudomonas phage C11 | 94109 | 49.391 | Pseudomonas | Group I | Pakpunavirus | Pakpunavirus | Skurskavirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa clinical strain TJC422 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_87 | |||
| NC_028651 | Hydrogenobaculum phage 1 | 19351 | 38.184 | Hydrogenobaculum | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Hydrogenobaculum | Low-quality | Genome-fragment | 25.100 | HMM-based (lower-bound) | lytic | ||||
| NC_028449 | Escherichia phage PA2 | 63569 | 50.169 | Escherichia | Group I | Oslovirus | Oslovirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli PA2 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_1;antirepressor orf_9;antirepressor orf_14;antirepressor orf_34;cro orf_37;cro orf_38;antirepressor orf_54 | |||
| NC_028448 | Escherichia phage slur14 | 167467 | 35.399 | Escherichia | Group I | Tequatrovirus | Tequatrovirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028256 | Betaguttavirus kodakarajimaense | 13769 | 55.501 | Unspecified | Unclassified | Betaguttavirus | Betaguttavirus | Unclassified | Guttaviridae | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Aeropyrum pernix K1 | Low-quality | Genome-fragment | 10.370 | HMM-based (lower-bound) | temperate | integrase orf_24 | |||
| NC_028248 | Escherichia phage slur16 | 136896 | 43.613 | Escherichia | Group I | Vequintavirus | Vequintavirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |