INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028666 | Streptococcus phage Str-PAP-1 | 36595 | 35.289 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus parauberis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_14 | |||
| NC_028665 | Gordonia phage GTE6 | 56982 | 67.797 | Gordonia | Group I | Dexdertvirus | Dexdertvirus | Schenleyvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae strain CON34 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028664 | Klebsiella phage Kp2 | 43963 | 53.784 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028663 | Cyanophage P-TIM40 | 188632 | 40.717 | Prochlorococcus | Group I | Libanvirus | Libanvirus | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus sp. NATL2A | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028662 | Mycobacterium phage Phlei | 50418 | 60.062 | Mycobacterium | Group I | Phleivirus | Phleivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium phlei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_26 | |||
| NC_028661 | Pseudomonas phage PPPL-1 | 41149 | 57.003 | Pseudomonas | Group I | Hennigervirus | Hennigervirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. actinidiae KBE9 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028660 | Escherichia phage phi191 | 61035 | 50.189 | Escherichia | Group I | Oslovirus | Oslovirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O111:H2 strain ED 191 | High-quality | High-quality | 92.440 | AAI-based (high-confidence) | temperate | antirepressor orf_3;antirepressor orf_6;cro orf_22;antirepressor orf_27;antirepressor orf_28;antirepressor orf_45;integrase orf_53 | |||
| NC_028659 | Klebsiella phage vB_KpnM_KB57 | 142987 | 44.616 | Klebsiella | Group I | Mydovirus | Mydovirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae M-9 | High-quality | High-quality | 96.910 | AAI-based (high-confidence) | lytic | ||||
| NC_028658 | Mycobacterium phage Swish | 68735 | 66.480 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 98.930 | AAI-based (high-confidence) | lytic | ||||
| NC_028657 | Pseudomonas phage YMC11/02/R656 | 60919 | 58.739 | Pseudomonas | Group I | Bugaksanvirus | Bugaksanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa YMC11/02/R656 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_55 |