INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_030925 | Bacillus phage Shbh1 | 138081 | 36.428 | Bacillus | Group I | Shalavirus | Shalavirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus sp. MGK1/ERV9 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_030924 | Gordonia phage Monty | 75680 | 58.948 | Gordonia | Group I | Montyvirus | Montyvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_030923 | Pseudomonas phage YMC11/06/C171_PPU_BP | 45417 | 60.354 | Pseudomonas | Group I | Kantovirus | Kantovirus | Corkvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas putida YMC11/06/C171 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_030921 | Gordonia phage Utz | 49768 | 67.652 | Gordonia | Group I | Jujuvirus | Jujuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.140 | AAI-based (high-confidence) | temperate | integrase orf_31;integrase orf_33;immunity orf_36;antirepressor orf_39 | |||
| NC_030920 | Bacillus phage Eldridge | 165868 | 40.407 | Bacillus | Group I | Eldridgevirus | Eldridgevirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus megaterium | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_030919 | Salmonella phage 118970_sal4 | 42418 | 46.813 | Salmonella | Group I | Lederbergvirus | Lederbergvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_3;cro orf_20;cro orf_63;antirepressor orf_64 | |||
| NC_030918 | Pseudomonas phage JBD93 | 36629 | 64.293 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PA14 | High-quality | High-quality | 96.210 | AAI-based (high-confidence) | temperate | cro orf_1 | |||
| NC_030917 | Gordonia phage OneUp | 93577 | 61.483 | Gordonia | Group I | Oneupvirus | Oneupvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_65;immunity orf_67 | |||
| NC_030916 | Tsukamurella phage TPA4 | 56212 | 70.542 | Tsukamurella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Tsukamurella paurometabola strain CON55 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_37 | |||
| NC_030915 | Gordonia phage Orchid | 80650 | 47.007 | Gordonia | Group I | Cratervirus | Cratervirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_70;cro orf_74 |