INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_030936 | Gordonia phage Bachita | 93843 | 61.948 | Gordonia | Group I | Smoothievirus | Smoothievirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_74;immunity orf_76 | |||
| NC_030935 | Gordonia phage GRU3 | 17727 | 66.509 | Gordonia | Group I | Grutrevirus | Grutrevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia rubropertincta strain CON38 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_17 | |||
| NC_030934 | Pseudomonas phage vB_PsyM_KIL1 | 90552 | 44.811 | Pseudomonas | Group I | Flaumdravirus | Flaumdravirus | Gorskivirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. porri LMG 28495 | High-quality | High-quality | 93.780 | AAI-based (high-confidence) | lytic | ||||
| NC_030933 | Staphylococcus phage Stau2 | 133798 | 29.974 | Staphylococcus | Group I | Silviavirus | Silviavirus | Twortvirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 98.300 | AAI-based (high-confidence) | lytic | ||||
| NC_030932 | Gordonia phage Gsput1 | 43505 | 62.832 | Gordonia | Group I | Gesputvirus | Gesputvirus | Ruthgordonvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia sputi | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_28 | |||
| NC_030931 | Pseudomonas phage phi2 | 41871 | 62.115 | Pseudomonas | Group I | Tunggulvirus | Tunggulvirus | Unclassified | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa WH-SGI-V-07173 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_030930 | Gordonia phage Bowser | 46570 | 67.112 | Gordonia | Group I | Bowservirus | Bowservirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 99.480 | AAI-based (high-confidence) | temperate | integrase orf_37;integrase orf_39;immunity orf_40 | |||
| NC_030929 | Pseudomonas phage JBD44 | 49033 | 58.493 | Pseudomonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PA14 | High-quality | High-quality | 99.920 | AAI-based (high-confidence) | temperate | integrase orf_36;integrase orf_44 | |||
| NC_030928 | Xanthomonas phage f20-Xaj | 43851 | 59.830 | Xanthomonas | Group I | Pradovirus | Pradovirus | Gujervirinae | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas arboricola pv. juglandis X-J303 | High-quality | High-quality | 98.620 | AAI-based (high-confidence) | lytic | ||||
| NC_030927 | Gordonia phage Splinter | 45858 | 66.130 | Gordonia | Group I | Vendettavirus | Vendettavirus | Ruthgordonvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_37;immunity orf_39 |