INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_031057 | Citrobacter phage vB_CfrM_CfP1 | 180219 | 43.119 | Citrobacter | Group I | Pseudotevenvirus | Pseudotevenvirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_031056 | Bacillus phage Deep Blue | 157501 | 39.947 | Bacillus | Group I | Caeruleovirus | Caeruleovirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus cereus BtB2-4 | High-quality | High-quality | 98.670 | AAI-based (high-confidence) | lytic | ||||
| NC_031055 | Bacillus phage PfEFR-5 | 43773 | 35.392 | Bacillus | Group I | Hubeivirus | Hubeivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus cereus EFR-5 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_24;integrase orf_33;antirepressor orf_36;integrase orf_63 | |||
| NC_031054 | Bacillus phage DirtyBetty | 162415 | 38.724 | Bacillus | Group I | Wphvirus | Wphvirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus thuringiensis subspecies kurstaki | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_031053 | Klebsiella phage PKP126 | 50934 | 50.730 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae KCTC 2242 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_031052 | Gordonia phage Twister6 | 57804 | 67.722 | Gordonia | Group I | Wizardvirus | Wizardvirus | Frickvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 97.410 | AAI-based (high-confidence) | temperate | immunity orf_23;integrase orf_46;integrase orf_49 | |||
| NC_031051 | Enterococcus phage SANTOR1 | 37933 | 34.540 | Enterococcus | Group I | Efquatrovirus | Efquatrovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis ATCC 19433 | High-quality | High-quality | 93.340 | AAI-based (high-confidence) | lytic | ||||
| NC_031050 | Escherichia phage vB_EcoS_NBD2 | 51802 | 49.817 | Escherichia | Group I | Vilniusvirus | Vilniusvirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli NovaBlue | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_031049 | Bacillus phage NotTheCreek | 161929 | 38.711 | Bacillus | Group I | Wphvirus | Wphvirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus thuringiensis subsp. kurstaki | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_031048 | Enterobacter phage Arya | 41918 | 54.108 | Enterobacter | Group I | Aryavirus | Aryavirus | Iiscvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterobacter sp. CT7 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic |