Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX670348Vibrio phage vB_VmeS_MHP4125543.481VibrioUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Vibrio metschnikovii VM4FMedium-qualityGenome-fragment61.490HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_70
PX668378Acinetobacter phage phiAR01410666839.179AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii PT61Medium-qualityGenome-fragment52.480AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_73
PX668377Acinetobacter phage phiAR01016560936.670AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii PT61CompleteHigh-quality100.000DTR (high-confidence) LazarusvirusLazarusvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX668376Acinetobacter phage phiAR00218867439.670AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii PT61Medium-qualityGenome-fragment75.550AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_185
PX667728Escherichia phage NL428835838.998EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli (DH5alpha)High-qualityHigh-quality100.000AAI-based (high-confidence) FelixounavirusFelixounavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX667142Staphylococcus phage EFLK1_S13066635.903StaphylococcusGroup I KochikohdavirusKochikohdavirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality94.150AAI-based (high-confidence) KochikohdavirusKochikohdavirus EFLK1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX667085Escherichia phage vB_EcoM_PPW915245739.021EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) PhapecoctavirusPhapecoctavirus Mt1B1P17Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX666696Klebsiella phage KP_NC204914050.456KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae W119High-qualityHigh-quality99.190AAI-based (high-confidence) WebervirusWebervirus RAD2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX666672Acinetobacter phage CP-p-AB-220574079239.417AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality98.480AAI-based (high-confidence) FriunavirusFriunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX666671Acinetobacter phage CP-p-AB-210064027939.499AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality97.250AAI-based (high-confidence) FriunavirusFriunavirus AB6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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