Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX670396Klebsiella phage RSU-F4K34580551.462KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) GansuvirusGansuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670395Klebsiella phage RSU-F4B34042252.207KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670394Klebsiella phage RSU-F3B13917552.408KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality97.720AAI-based (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670393Klebsiella phage RSU-F2K2-23524849.452KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) ElveevirusElveevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_20
PX670392Klebsiella phage RSU-F1K24367553.630KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality99.490AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670391Klebsiella phage RSU-F1K14367353.628KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality99.480AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670390Klebsiella phage RSU-F10L4069752.503KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) BenllochvirusBenllochvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX670389Klebsiella phage RSU-219-2F64074150.858KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) KayfunavirusKayfunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PX670388Klebsiella phage RSU-219-1F104750347.532KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
PX670367Klebsiella phage vB_KpnS_P10HW4968250.725KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae KH1127-5CompleteHigh-quality100.000DTR (high-confidence) WebervirusWebervirus 1086Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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