INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_049934 | Enterococcus phage vB_EfaP_Ef7.2 | 18737 | 33.159 | Enterococcus | Group I | Copernicusvirus | Copernicusvirus | Sarlesvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis strain AH7 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049933 | Enterococcus phage vB_EfaP_Ef6.3 | 18136 | 32.637 | Enterococcus | Group I | Copernicusvirus | Copernicusvirus | Sarlesvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis strain AH6 | High-quality | High-quality | 98.920 | AAI-based (high-confidence) | lytic | ||||
| NC_049932 | Enterococcus phage vB_EfaP_Ef6.2 | 17966 | 32.823 | Enterococcus | Group I | Copernicusvirus | Copernicusvirus | Sarlesvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis strain AH6 | High-quality | High-quality | 98.010 | AAI-based (high-confidence) | lytic | ||||
| NC_049931 | Enterococcus phage vB_EfaP_IME199 | 18838 | 34.627 | Enterococcus | Group I | Minhovirus | Minhovirus | Sarlesvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium | Complete | High-quality | 100.000 | ITR (high-confidence) | lytic | ||||
| NC_049930 | Enterococcus phage vB_EfaP_Zip | 18742 | 35.044 | Enterococcus | Group I | Minhovirus | Minhovirus | Sarlesvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium strain C410 | High-quality | High-quality | 97.800 | AAI-based (high-confidence) | lytic | ||||
| NC_049929 | Microbacterium phage Teagan | 41793 | 63.451 | Microbacterium | Group I | Ilzatvirus | Ilzatvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 SEA | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049928 | Microbacterium phage MonChoix | 41670 | 63.365 | Microbacterium | Group I | Ilzatvirus | Ilzatvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 SEA | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049927 | Microbacterium phage McGalleon | 42562 | 63.658 | Microbacterium | Group I | Ilzatvirus | Ilzatvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 SEA | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049926 | Escherichia phage ECP1 | 40469 | 51.009 | Escherichia | Group I | Wongtaivirus | Wongtaivirus | Hendrixvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli MG1655 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_47;antirepressor orf_58 | |||
| NC_049925 | Stx converting phage vB_EcoS_P27 | 61580 | 49.169 | Unspecified | Group I | Traversvirus | Traversvirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 93.880 | AAI-based (high-confidence) | temperate | cro orf_28;cro orf_29;antirepressor orf_40;antirepressor orf_54;integrase orf_81;antirepressor orf_83 |