INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_054959 | Ralstonia phage Gerry | 60898 | 64.730 | Ralstonia | Group I | Cimandefvirus | Cimandefvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-33 (MT061) | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | antirepressor orf_62 | |||
| NC_054958 | Ralstonia phage Gamede | 58603 | 64.602 | Ralstonia | Group I | Cimandefvirus | Cimandefvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-31 (MT035) | High-quality | High-quality | 99.270 | AAI-based (high-confidence) | temperate | antirepressor orf_7;antirepressor orf_64 | |||
| NC_054957 | Ralstonia phage Eline | 57352 | 64.622 | Ralstonia | Group I | Cimandefvirus | Cimandefvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-33 (MT061) | High-quality | High-quality | 97.170 | AAI-based (high-confidence) | temperate | antirepressor orf_13 | |||
| NC_054956 | Ralstonia phage Cimandef | 55171 | 64.822 | Ralstonia | Group I | Cimandefvirus | Cimandefvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-31 (MT043) | High-quality | High-quality | 93.610 | AAI-based (high-confidence) | lytic | ||||
| NC_054955 | Ralstonia phage Raharianne | 46321 | 60.547 | Ralstonia | Group I | Rahariannevirus | Rahariannevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-31 (MT043) | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054954 | Natrialba phage PhiCh1 | 58487 | 61.898 | Natrialba | Group I | Myohalovirus | Myohalovirus | Unclassified | Vertoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Natrialba magadii ATCC 43099 | High-quality | High-quality | 99.980 | AAI-based (high-confidence) | lytic | ||||
| NC_054953 | Halobacterium phage ChaoS9 | 55145 | 65.273 | Halobacterium | Group I | Chaovirus | Chaovirus | Unclassified | Vertoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Halobacterium salinarum strain S9 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054952 | Stenotrophomonas phage IME-SM1 | 159514 | 54.142 | Stenotrophomonas | Group I | Menderavirus | Menderavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas sp. | High-quality | High-quality | 99.930 | AAI-based (high-confidence) | lytic | ||||
| NC_054946 | Ralstonia phage Simangalove | 44834 | 62.252 | Ralstonia | Group I | Bakolyvirus | Bakolyvirus | Mascarenevirinae | Anamaviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-31 (MT043) | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_054945 | Yersinia phage vB_YepM_ZN18 | 167948 | 35.353 | Yersinia | Group I | Tequatrovirus | Tequatrovirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia pseudotuberculosis | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |