INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OL502173	Salmonella phage JN-S202001	111256	40.014	Salmonella	Group I	Epseptimavirus	Epseptimavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	High-quality	High-quality	98.360	AAI-based (high-confidence)	Epseptimavirus	Epseptimavirus JNS202001	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL477635	Clostridium phage DOBBIE2	39803	30.349	Clostridium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Clostridium perfringens FORC 25	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	antirepressor orf_62
OL474141	Salmonella phage ph2-2	85944	38.803	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Paratyphi A strain 201107	High-quality	High-quality	97.620	AAI-based (high-confidence)	Felixounavirus	Felixounavirus ph22	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL474125	Klebsiella phage BUCT86	44542	54.328	Klebsiella	Group I	Drulisvirus	Drulisvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Drulisvirus	Drulisvirus BUCT86	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL473897	Pseudomonas phage Pa BHU-15	91015	52.108	Pseudomonas	Group I	Samunavirus	Samunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	97.670	AAI-based (high-confidence)	Samunavirus	Samunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_32
OL473597	Synechococcus phage S-SZBM1	177834	43.313	Synechococcus	Group I	Shenzhenivirus	Shenzhenivirus	Unclassified	Kyanoviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Synechococcus sp. CB0101	High-quality	High-quality	96.660	AAI-based (high-confidence)	Shenzhenivirus	Shenzhenivirus sszbm1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL455900	Arthrobacter phage BaileyBlu	40447	65.837	Arthrobacter	Group I	Baileybluvirus	Baileybluvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sulfureus NRRL B-14730	High-quality	High-quality	100.000	AAI-based (high-confidence)	Baileybluvirus	Baileybluvirus baileyblu	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL455899	Mycobacterium phage Vetrix	76520	58.939	Mycobacterium	Group I	Faithunavirus	Faithunavirus	Lclasvirinae	Vilmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Faithunavirus	Faithunavirus faith1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_39;immunity orf_41;cro orf_42
OL455898	Mycobacterium phage Abbyshoes	51324	63.744	Mycobacterium	Group I	Fromanvirus	Fromanvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.840	AAI-based (high-confidence)	Fromanvirus	Fromanvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_37;immunity orf_73
OL455897	Streptomyces phage Treat	46094	59.596	Streptomyces	Group I	Immanueltrevirus	Immanueltrevirus	Beephvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces griseus ATCC 10137	Complete	High-quality	100.000	DTR (high-confidence)	Immanueltrevirus	Immanueltrevirus immanuel3	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic