INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OM475429	Escherichia phage 11W	31564	51.384	Escherichia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.710	AAI-based (high-confidence)	Peduovirus	Peduovirus 11W	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30
OM475428	Escherichia phage 1W	49662	50.016	Escherichia	Group I	Bievrevirus	Bievrevirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bievrevirus	Bievrevirus bv4A7	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_32;cro orf_45
OM475427	Escherichia phage D2	49197	50.007	Escherichia	Group I	Bievrevirus	Bievrevirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bievrevirus	Bievrevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_33
OM475426	Escherichia phage D8	31345	51.951	Escherichia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.020	AAI-based (high-confidence)	Peduovirus	Peduovirus P24E6b	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_29
OM471864	Acinetobacter phage Cato	45188	37.351	Acinetobacter	Group I	Miklukhovirus	Miklukhovirus	Unclassified	Hirszfeldviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii strain KZ-1102	High-quality	High-quality	100.000	AAI-based (high-confidence)	Miklukhovirus	Miklukhovirus Cato	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM471789	Pseudomonas phage PCW2	40117	57.564	Pseudomonas	Group I	Ghunavirus	Ghunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas putida	High-quality	High-quality	98.680	AAI-based (high-confidence)	Ghunavirus	Ghunavirus PCW2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM457002	Enterobacter phage EP1	39940	52.076	Enterobacter	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus EP1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OM457001	Serratia phage SP1	168080	42.102	Serratia	Group I	Muldoonvirus	Muldoonvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	100.000	AAI-based (high-confidence)	Muldoonvirus	Muldoonvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM456492	Salmonella phage SaP7	240613	48.418	Salmonella	Group I	Seoulvirus	Seoulvirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	High-quality	High-quality	97.920	AAI-based (high-confidence)	Seoulvirus	Seoulvirus SPN3US	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_109
OM439675	Staphylococcus phage vB_SauS_Mh4	44199	34.648	Staphylococcus	Group I	Dubowvirus	Dubowvirus	Azeredovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Dubowvirus	Dubowvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_4;antirepressor orf_11;antirepressor orf_13