INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OM515228	Helicobacter phage HPy1R	31162	37.138	Helicobacter	Group I	Schmidvirus	Schmidvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Helicobacter pylori 11507	High-quality	High-quality	100.000	AAI-based (high-confidence)	Schmidvirus	Schmidvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_2
OM513680	Erwinia phage Loshitsa2	43092	53.998	Erwinia	Group I	Micantvirus	Micantvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora 1/79Sm	High-quality	High-quality	99.260	AAI-based (high-confidence)	Micantvirus	Micantvirus loshitsa2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM513679	Erwinia phage Micant	43028	54.016	Erwinia	Group I	Micantvirus	Micantvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora 1/79Sm	High-quality	High-quality	99.110	AAI-based (high-confidence)	Micantvirus	Micantvirus micant	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM486945	Erwinia phage VyarbaL	44768	49.774	Erwinia	Group I	Eracentumvirus	Eracentumvirus	Molineuxvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora 1/79Sm	High-quality	High-quality	97.850	AAI-based (high-confidence)	Eracentumvirus	Eracentumvirus S2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OM475435	Escherichia phage E26-Berryhill	48850	49.785	Escherichia	Group I	Lambdavirus	Lambdavirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Lambdavirus	Lambdavirus lambda	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_28;cro orf_45;cro orf_46
OM475434	Escherichia phage 12W	31347	51.903	Escherichia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.030	AAI-based (high-confidence)	Peduovirus	Peduovirus P24E6b	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_29
OM475433	Escherichia phage 10W	32279	51.888	Escherichia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Peduovirus	Peduovirus P24C9	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_12
OM475432	Escherichia phage 4W	48634	49.840	Escherichia	Group I	Lambdavirus	Lambdavirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Lambdavirus	Lambdavirus lambda	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_28;cro orf_45;cro orf_46
OM475431	Escherichia phage 9W	31622	52.106	Escherichia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Peduovirus	Peduovirus P22H4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_29
OM475430	Escherichia phage 3W	49277	49.776	Escherichia	Group I	Bievrevirus	Bievrevirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Bievrevirus	Bievrevirus bv4A7	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_32;cro orf_45